PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_23649
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 113aa    MW: 12692.4 Da    PI: 9.6831
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_23649genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.95.2e-13942340
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtae 40
                y+G+r+++ +g+W+AeIrdp++     r++lg+f t+e
  PEQU_23649  9 YRGIRRRP-WGKWAAEIRDPRK---GVRVWLGTFSTPE 42
                9*******.**********954...4*********987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.8E-18843IPR001471AP2/ERF domain
SMARTSM003801.9E-11860IPR001471AP2/ERF domain
CDDcd000181.11E-17842No hitNo description
SuperFamilySSF541711.96E-12843IPR016177DNA-binding domain
PROSITE profilePS5103216.002842IPR001471AP2/ERF domain
PRINTSPR003675.7E-9920IPR001471AP2/ERF domain
PfamPF008473.7E-7942IPR001471AP2/ERF domain
PRINTSPR003675.7E-93147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    Send to blast
KKKVRKNIYR GIRRRPWGKW AAEIRDPRKG VRVWLGTFST PESGCVSPAT TEVLKERISS  60
LETFLGLEHV VGQVQESGES VIGGGVGERF WAWDDDLGLM DGSDTAKYRS ELL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1115KKVRKNIYRGIRRRP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001235751.12e-21uncharacterized protein LOC100527415
RefseqXP_014507850.15e-21PREDICTED: ethylene-responsive transcription factor RAP2-3-like isoform X1
RefseqXP_014507851.15e-21PREDICTED: ethylene-responsive transcription factor RAP2-3-like isoform X2
TrEMBLA0A0K9PKR24e-22A0A0K9PKR2_Z
STRINGGLYMA07G37410.18e-21(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.11e-21ethylene-responsive element binding protein